Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 CT030135.2-201ENSMUST00000225255 893 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm9873-201ENSMUST00000063891 1097 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm25700-201ENSMUST00000177693 110 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm37666-201ENSMUST00000194110 866 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Gm44064-201ENSMUST00000204964 1087 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Celf4-206ENSMUST00000224553 1729 ntBASIC7.44□□□□□ -1.22
Ush2AQ2QI47 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm23270-201ENSMUST00000104055 131 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm45527-201ENSMUST00000211052 774 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm8749-201ENSMUST00000117737 331 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm12036-201ENSMUST00000120008 530 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Mir1901-201ENSMUST00000122616 78 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 AC154184.3-201ENSMUST00000225620 1090 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm14460-201ENSMUST00000121511 639 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm12363-201ENSMUST00000122250 668 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Prrxl1-205ENSMUST00000228878 723 ntBASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ush2AQ2QI47 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm26361-201ENSMUST00000158868 186 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm11531-201ENSMUST00000117614 555 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm26956-201ENSMUST00000182176 986 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm8712-201ENSMUST00000221090 701 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Gm14608-201ENSMUST00000120030 1553 ntBASIC7.42□□□□□ -1.22
Ush2AQ2QI47 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ush2AQ2QI47 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms