Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.73□□□□□ -0.37
Chd8Q09XV5 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.73□□□□□ -0.37
Chd8Q09XV5 Gm8768-201ENSMUST00000220020 826 ntBASIC12.73□□□□□ -0.37
Chd8Q09XV5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.72□□□□□ -0.37
Chd8Q09XV5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Gm12948-201ENSMUST00000119406 682 ntBASIC12.72□□□□□ -0.37
Chd8Q09XV5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.72□□□□□ -0.37
Chd8Q09XV5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chd8Q09XV5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Gm10268-201ENSMUST00000085340 555 ntBASIC12.71□□□□□ -0.37
Chd8Q09XV5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chd8Q09XV5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Chd8Q09XV5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd8Q09XV5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Gm13369-201ENSMUST00000119442 987 ntBASIC12.71□□□□□ -0.38
Chd8Q09XV5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Gm38210-201ENSMUST00000191944 809 ntBASIC12.71□□□□□ -0.38
Chd8Q09XV5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd8Q09XV5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Gm12795-201ENSMUST00000117594 539 ntBASIC12.7□□□□□ -0.38
Chd8Q09XV5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.7□□□□□ -0.38
Chd8Q09XV5 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.7□□□□□ -0.38
Chd8Q09XV5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.7□□□□□ -0.38
Chd8Q09XV5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd8Q09XV5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms