Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.56□□□□□ -0.08
Ebf1Q07802 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf1Q07802 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ebf1Q07802 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf1Q07802 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf1Q07802 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf1Q07802 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ebf1Q07802 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ebf1Q07802 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ebf1Q07802 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf1Q07802 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.56□□□□□ -0.08
Ebf1Q07802 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.55□□□□□ -0.08
Ebf1Q07802 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Mir1897-201ENSMUST00000122581 272 ntBASIC14.55□□□□□ -0.08
Ebf1Q07802 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.55□□□□□ -0.08
Ebf1Q07802 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.55□□□□□ -0.08
Ebf1Q07802 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.55□□□□□ -0.08
Ebf1Q07802 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
Ebf1Q07802 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.55□□□□□ -0.08
Ebf1Q07802 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.55□□□□□ -0.08
Ebf1Q07802 Gm8515-201ENSMUST00000194852 576 ntBASIC14.55□□□□□ -0.08
Ebf1Q07802 Gm16476-201ENSMUST00000221544 139 ntBASIC14.55□□□□□ -0.08
Ebf1Q07802 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ebf1Q07802 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.55□□□□□ -0.08
Ebf1Q07802 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ebf1Q07802 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf1Q07802 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ebf1Q07802 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm4875-201ENSMUST00000118257 786 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm12134-201ENSMUST00000122109 520 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm3436-201ENSMUST00000179930 840 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm46209-201ENSMUST00000217912 553 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ebf1Q07802 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf1Q07802 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.54□□□□□ -0.08
Ebf1Q07802 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms