Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.12□□□□□ -0.63
Cdx4Q07424 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx4Q07424 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.12□□□□□ -0.63
Cdx4Q07424 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx4Q07424 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.12□□□□□ -0.63
Cdx4Q07424 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx4Q07424 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx4Q07424 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdx4Q07424 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx4Q07424 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.11□□□□□ -0.63
Cdx4Q07424 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.11□□□□□ -0.63
Cdx4Q07424 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.11□□□□□ -0.63
Cdx4Q07424 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.11□□□□□ -0.63
Cdx4Q07424 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.11□□□□□ -0.63
Cdx4Q07424 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.11□□□□□ -0.63
Cdx4Q07424 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdx4Q07424 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.11□□□□□ -0.63
Cdx4Q07424 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx4Q07424 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.1□□□□□ -0.63
Cdx4Q07424 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.1□□□□□ -0.63
Cdx4Q07424 Gm11745-201ENSMUST00000121669 448 ntBASIC11.1□□□□□ -0.63
Cdx4Q07424 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Gm44872-201ENSMUST00000207864 420 ntBASIC11.1□□□□□ -0.63
Cdx4Q07424 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.1□□□□□ -0.63
Cdx4Q07424 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Cdx4Q07424 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx4Q07424 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms