Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.35□□□□□ -0.75
Hspg2Q05793 Gm26464-201ENSMUST00000157094 305 ntBASIC10.35□□□□□ -0.75
Hspg2Q05793 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.35□□□□□ -0.75
Hspg2Q05793 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.35□□□□□ -0.75
Hspg2Q05793 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.35□□□□□ -0.75
Hspg2Q05793 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Hspg2Q05793 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hspg2Q05793 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Hspg2Q05793 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Gm13461-201ENSMUST00000120980 662 ntBASIC10.35□□□□□ -0.75
Hspg2Q05793 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Gm43094-201ENSMUST00000196549 921 ntBASIC10.35□□□□□ -0.75
Hspg2Q05793 Rps4l-202ENSMUST00000204242 789 ntBASIC10.35□□□□□ -0.75
Hspg2Q05793 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hspg2Q05793 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hspg2Q05793 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gm27341-201ENSMUST00000183570 106 ntBASIC10.34□□□□□ -0.75
Hspg2Q05793 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.34□□□□□ -0.75
Hspg2Q05793 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.34□□□□□ -0.75
Hspg2Q05793 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gm8810-201ENSMUST00000172895 754 ntBASIC10.34□□□□□ -0.75
Hspg2Q05793 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hspg2Q05793 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.34□□□□□ -0.75
Hspg2Q05793 Gm17795-201ENSMUST00000214505 757 ntBASIC10.34□□□□□ -0.75
Hspg2Q05793 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.34□□□□□ -0.75
Hspg2Q05793 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hspg2Q05793 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hspg2Q05793 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hspg2Q05793 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.33□□□□□ -0.76
Hspg2Q05793 Cts7-204ENSMUST00000225321 1257 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hspg2Q05793 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.33□□□□□ -0.76
Hspg2Q05793 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.33□□□□□ -0.76
Hspg2Q05793 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Hspg2Q05793 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hspg2Q05793 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.33□□□□□ -0.76
Hspg2Q05793 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms