Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col9a1Q05722 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.04□□□□□ -0.16
Col9a1Q05722 Gm5051-201ENSMUST00000204085 485 ntBASIC14.04□□□□□ -0.16
Col9a1Q05722 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.04□□□□□ -0.16
Col9a1Q05722 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.04□□□□□ -0.16
Col9a1Q05722 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col9a1Q05722 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Col9a1Q05722 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col9a1Q05722 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col9a1Q05722 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.04□□□□□ -0.16
Col9a1Q05722 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col9a1Q05722 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Ighv10-4-201ENSMUST00000193702 299 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm44146-201ENSMUST00000203508 816 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Gm19212-201ENSMUST00000216642 862 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 CT009711.2-202ENSMUST00000224538 973 ntBASIC14.03□□□□□ -0.16
Col9a1Q05722 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a1Q05722 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col9a1Q05722 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.02□□□□□ -0.16
Col9a1Q05722 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Col9a1Q05722 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.02□□□□□ -0.16
Col9a1Q05722 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.02□□□□□ -0.16
Col9a1Q05722 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a1Q05722 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm11803-201ENSMUST00000119966 444 ntBASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm11597-201ENSMUST00000121423 964 ntBASIC14.02□□□□□ -0.17
Col9a1Q05722 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm13786-201ENSMUST00000122371 333 ntBASIC14.02□□□□□ -0.17
Col9a1Q05722 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.02□□□□□ -0.17
Col9a1Q05722 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.02□□□□□ -0.17
Col9a1Q05722 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm20426-201ENSMUST00000173657 440 ntBASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm5070-201ENSMUST00000177599 862 ntBASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm27023-201ENSMUST00000182372 285 ntBASIC14.02□□□□□ -0.17
Col9a1Q05722 Gm27331-201ENSMUST00000183705 60 ntBASIC14.02□□□□□ -0.17
Col9a1Q05722 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms