Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox9Q04887 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox9Q04887 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox9Q04887 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Gm8749-201ENSMUST00000117737 331 ntBASIC14.76□□□□□ -0.05
Sox9Q04887 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox9Q04887 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox9Q04887 Gm7584-201ENSMUST00000175829 940 ntBASIC14.76□□□□□ -0.05
Sox9Q04887 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox9Q04887 Gm29199-201ENSMUST00000187766 775 ntBASIC14.76□□□□□ -0.05
Sox9Q04887 Gm18753-201ENSMUST00000201000 566 ntBASIC14.76□□□□□ -0.05
Sox9Q04887 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox9Q04887 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox9Q04887 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox9Q04887 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox9Q04887 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.75□□□□□ -0.05
Sox9Q04887 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.75□□□□□ -0.05
Sox9Q04887 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.75□□□□□ -0.05
Sox9Q04887 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.75□□□□□ -0.05
Sox9Q04887 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.75□□□□□ -0.05
Sox9Q04887 Gm38266-201ENSMUST00000194931 421 ntBASIC14.75□□□□□ -0.05
Sox9Q04887 Olfr286-202ENSMUST00000205305 969 ntBASIC14.75□□□□□ -0.05
Sox9Q04887 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sox9Q04887 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sox9Q04887 Gm24526-201ENSMUST00000082921 158 ntBASIC14.75□□□□□ -0.05
Sox9Q04887 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.75□□□□□ -0.05
Sox9Q04887 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.75□□□□□ -0.05
Sox9Q04887 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox9Q04887 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sox9Q04887 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.74□□□□□ -0.05
Sox9Q04887 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.74□□□□□ -0.05
Sox9Q04887 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.74□□□□□ -0.05
Sox9Q04887 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.74□□□□□ -0.05
Sox9Q04887 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.74□□□□□ -0.05
Sox9Q04887 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.74□□□□□ -0.05
Sox9Q04887 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 Gm43818-201ENSMUST00000200605 466 ntBASIC14.74□□□□□ -0.05
Sox9Q04887 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.74□□□□□ -0.05
Sox9Q04887 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.74□□□□□ -0.05
Sox9Q04887 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.74□□□□□ -0.05
Sox9Q04887 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox9Q04887 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox9Q04887 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Sox9Q04887 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox9Q04887 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox9Q04887 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox9Q04887 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms