Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.65□□□□□ -0.06
Thumpd3P97770 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.65□□□□□ -0.06
Thumpd3P97770 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Thumpd3P97770 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Acot6-202ENSMUST00000222921 3622 ntBASIC14.65□□□□□ -0.06
Thumpd3P97770 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.65□□□□□ -0.06
Thumpd3P97770 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.64□□□□□ -0.07
Thumpd3P97770 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.64□□□□□ -0.07
Thumpd3P97770 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.64□□□□□ -0.07
Thumpd3P97770 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.64□□□□□ -0.07
Thumpd3P97770 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Thumpd3P97770 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Thumpd3P97770 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Thumpd3P97770 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Gm26308-201ENSMUST00000157768 69 ntBASIC14.63□□□□□ -0.07
Thumpd3P97770 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Thumpd3P97770 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Thumpd3P97770 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.62□□□□□ -0.07
Thumpd3P97770 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Thumpd3P97770 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Thumpd3P97770 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Thumpd3P97770 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Thumpd3P97770 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Thumpd3P97770 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Thumpd3P97770 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.62□□□□□ -0.07
Thumpd3P97770 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Thumpd3P97770 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Thumpd3P97770 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Thumpd3P97770 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms