Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-2P97503 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.59□□□□□ -0.23
Nkx3-2P97503 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.59□□□□□ -0.23
Nkx3-2P97503 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx3-2P97503 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx3-2P97503 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx3-2P97503 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx3-2P97503 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.58□□□□□ -0.24
Nkx3-2P97503 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.58□□□□□ -0.24
Nkx3-2P97503 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx3-2P97503 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.57□□□□□ -0.24
Nkx3-2P97503 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Gm5566-201ENSMUST00000116118 459 ntBASIC13.57□□□□□ -0.24
Nkx3-2P97503 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Gm27680-201ENSMUST00000184192 160 ntBASIC13.57□□□□□ -0.24
Nkx3-2P97503 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Gm45098-201ENSMUST00000207179 657 ntBASIC13.57□□□□□ -0.24
Nkx3-2P97503 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx3-2P97503 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms