Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Snora78-201ENSMUST00000158630 128 ntBASIC17.88■□□□□ 0.45
Smarcc1P97496 Gm17420-201ENSMUST00000164753 153 ntBASIC17.88■□□□□ 0.45
Smarcc1P97496 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Smarcc1P97496 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Gm8463-201ENSMUST00000208573 613 ntBASIC17.88■□□□□ 0.45
Smarcc1P97496 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Smarcc1P97496 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.88■□□□□ 0.45
Smarcc1P97496 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcc1P97496 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Gm37424-201ENSMUST00000191727 561 ntBASIC17.87■□□□□ 0.45
Smarcc1P97496 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smarcc1P97496 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.87■□□□□ 0.45
Smarcc1P97496 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.87■□□□□ 0.45
Smarcc1P97496 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcc1P97496 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.86■□□□□ 0.45
Smarcc1P97496 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.86■□□□□ 0.45
Smarcc1P97496 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smarcc1P97496 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Gm15240-201ENSMUST00000118156 720 ntBASIC17.86■□□□□ 0.45
Smarcc1P97496 Gm14660-201ENSMUST00000119809 575 ntBASIC17.86■□□□□ 0.45
Smarcc1P97496 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Smarcc1P97496 Gm15429-201ENSMUST00000151268 798 ntBASIC17.86■□□□□ 0.45
Smarcc1P97496 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smarcc1P97496 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.86■□□□□ 0.45
Smarcc1P97496 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.86■□□□□ 0.45
Smarcc1P97496 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcc1P97496 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.85■□□□□ 0.45
Smarcc1P97496 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 Gm11814-201ENSMUST00000119515 929 ntBASIC17.85■□□□□ 0.45
Smarcc1P97496 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarcc1P97496 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.85■□□□□ 0.45
Smarcc1P97496 Gm8652-201ENSMUST00000181363 964 ntBASIC17.85■□□□□ 0.45
Smarcc1P97496 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.85■□□□□ 0.45
Smarcc1P97496 Gm18905-201ENSMUST00000205454 928 ntBASIC17.85■□□□□ 0.45
Smarcc1P97496 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.85■□□□□ 0.45
Smarcc1P97496 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcc1P97496 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms