Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.06□□□□□ -0.48
SgcaP82350 Mir7071-201ENSMUST00000184847 69 ntBASIC12.06□□□□□ -0.48
SgcaP82350 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.06□□□□□ -0.48
SgcaP82350 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.06□□□□□ -0.48
SgcaP82350 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.06□□□□□ -0.48
SgcaP82350 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
SgcaP82350 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.05□□□□□ -0.48
SgcaP82350 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.05□□□□□ -0.48
SgcaP82350 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.05□□□□□ -0.48
SgcaP82350 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SgcaP82350 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.05□□□□□ -0.48
SgcaP82350 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.05□□□□□ -0.48
SgcaP82350 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SgcaP82350 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.05□□□□□ -0.48
SgcaP82350 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SgcaP82350 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcaP82350 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.05□□□□□ -0.48
SgcaP82350 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SgcaP82350 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SgcaP82350 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.04□□□□□ -0.48
SgcaP82350 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SgcaP82350 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.04□□□□□ -0.48
SgcaP82350 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.04□□□□□ -0.48
SgcaP82350 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.04□□□□□ -0.48
SgcaP82350 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcaP82350 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.04□□□□□ -0.48
SgcaP82350 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
SgcaP82350 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
SgcaP82350 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
SgcaP82350 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.04□□□□□ -0.48
SgcaP82350 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.04□□□□□ -0.48
SgcaP82350 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.04□□□□□ -0.48
SgcaP82350 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.04□□□□□ -0.48
SgcaP82350 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcaP82350 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms