Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SgcbP82349 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.82□□□□□ -0.36
SgcbP82349 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SgcbP82349 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SgcbP82349 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SgcbP82349 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SgcbP82349 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Gm13015-201ENSMUST00000118674 204 ntBASIC12.82□□□□□ -0.36
SgcbP82349 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SgcbP82349 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SgcbP82349 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SgcbP82349 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgcbP82349 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SgcbP82349 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SgcbP82349 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
SgcbP82349 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SgcbP82349 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.81□□□□□ -0.36
SgcbP82349 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.81□□□□□ -0.36
SgcbP82349 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SgcbP82349 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.81□□□□□ -0.36
SgcbP82349 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.81□□□□□ -0.36
SgcbP82349 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.81□□□□□ -0.36
SgcbP82349 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.81□□□□□ -0.36
SgcbP82349 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.81□□□□□ -0.36
SgcbP82349 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.81□□□□□ -0.36
SgcbP82349 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcbP82349 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SgcbP82349 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.8□□□□□ -0.36
SgcbP82349 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SgcbP82349 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SgcbP82349 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SgcbP82349 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SgcbP82349 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.8□□□□□ -0.36
SgcbP82349 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.8□□□□□ -0.36
SgcbP82349 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.8□□□□□ -0.36
SgcbP82349 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SgcbP82349 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SgcbP82349 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SgcbP82349 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SgcbP82349 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SgcbP82349 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.8□□□□□ -0.36
SgcbP82349 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcbP82349 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms