Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hmgb1P63158 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Hmgb1P63158 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.8■□□□□ 0.12
Hmgb1P63158 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.8■□□□□ 0.12
Hmgb1P63158 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Gm1401-201ENSMUST00000122048 772 ntBASIC15.8■□□□□ 0.12
Hmgb1P63158 Mir8117-201ENSMUST00000184773 107 ntBASIC15.8■□□□□ 0.12
Hmgb1P63158 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.8■□□□□ 0.12
Hmgb1P63158 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Gm7461-201ENSMUST00000058918 827 ntBASIC15.8■□□□□ 0.12
Hmgb1P63158 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Hmgb1P63158 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb1P63158 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.79■□□□□ 0.12
Hmgb1P63158 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.79■□□□□ 0.12
Hmgb1P63158 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.79■□□□□ 0.12
Hmgb1P63158 Gm15483-201ENSMUST00000120338 456 ntBASIC15.79■□□□□ 0.12
Hmgb1P63158 Gm10275-202ENSMUST00000168697 495 ntBASIC15.79■□□□□ 0.12
Hmgb1P63158 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.79■□□□□ 0.12
Hmgb1P63158 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Gm10275-201ENSMUST00000092620 635 ntBASIC15.79■□□□□ 0.12
Hmgb1P63158 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hmgb1P63158 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb1P63158 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb1P63158 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hmgb1P63158 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.78■□□□□ 0.12
Hmgb1P63158 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmgb1P63158 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.78■□□□□ 0.12
Hmgb1P63158 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.78■□□□□ 0.12
Hmgb1P63158 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.78■□□□□ 0.12
Hmgb1P63158 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hmgb1P63158 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmgb1P63158 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb1P63158 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.77■□□□□ 0.12
Hmgb1P63158 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.77■□□□□ 0.12
Hmgb1P63158 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.77■□□□□ 0.12
Hmgb1P63158 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb1P63158 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Hmgb1P63158 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms