Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nup43P59235 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nup43P59235 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.57□□□□□ -0.24
Nup43P59235 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.57□□□□□ -0.24
Nup43P59235 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.57□□□□□ -0.24
Nup43P59235 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nup43P59235 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.57□□□□□ -0.24
Nup43P59235 Gm13823-201ENSMUST00000119930 345 ntBASIC13.57□□□□□ -0.24
Nup43P59235 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.57□□□□□ -0.24
Nup43P59235 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Gm25948-201ENSMUST00000175334 112 ntBASIC13.57□□□□□ -0.24
Nup43P59235 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Gm18766-201ENSMUST00000189811 808 ntBASIC13.57□□□□□ -0.24
Nup43P59235 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.57□□□□□ -0.24
Nup43P59235 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Nup43P59235 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Nup43P59235 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.57□□□□□ -0.24
Nup43P59235 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.57□□□□□ -0.24
Nup43P59235 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Nup43P59235 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nup43P59235 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Nup43P59235 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup43P59235 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nup43P59235 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup43P59235 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.56□□□□□ -0.24
Nup43P59235 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nup43P59235 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.56□□□□□ -0.24
Nup43P59235 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.56□□□□□ -0.24
Nup43P59235 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.56□□□□□ -0.24
Nup43P59235 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup43P59235 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
Nup43P59235 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nup43P59235 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nup43P59235 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Nup43P59235 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nup43P59235 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup43P59235 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Nup43P59235 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nup43P59235 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup43P59235 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup43P59235 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nup43P59235 Gm6415-201ENSMUST00000118488 348 ntBASIC13.55□□□□□ -0.24
Nup43P59235 Gm6222-201ENSMUST00000120787 396 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms