Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.86□□□□□ -0.35
Abcd3P55096 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.86□□□□□ -0.35
Abcd3P55096 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.86□□□□□ -0.35
Abcd3P55096 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abcd3P55096 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Abcd3P55096 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Abcd3P55096 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Abcd3P55096 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Abcd3P55096 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Abcd3P55096 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Abcd3P55096 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.85□□□□□ -0.35
Abcd3P55096 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.85□□□□□ -0.35
Abcd3P55096 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.85□□□□□ -0.35
Abcd3P55096 Gm2810-201ENSMUST00000118681 990 ntBASIC12.85□□□□□ -0.35
Abcd3P55096 Gm11745-201ENSMUST00000121669 448 ntBASIC12.85□□□□□ -0.35
Abcd3P55096 Gm25911-201ENSMUST00000157621 56 ntBASIC12.85□□□□□ -0.35
Abcd3P55096 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.85□□□□□ -0.35
Abcd3P55096 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Abcd3P55096 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Abcd3P55096 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.85□□□□□ -0.35
Abcd3P55096 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Abcd3P55096 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.85□□□□□ -0.35
Abcd3P55096 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abcd3P55096 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.84□□□□□ -0.35
Abcd3P55096 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Abcd3P55096 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Abcd3P55096 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.84□□□□□ -0.35
Abcd3P55096 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.84□□□□□ -0.35
Abcd3P55096 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.84□□□□□ -0.35
Abcd3P55096 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Abcd3P55096 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Abcd3P55096 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Abcd3P55096 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Abcd3P55096 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.83□□□□□ -0.35
Abcd3P55096 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.83□□□□□ -0.36
Abcd3P55096 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abcd3P55096 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abcd3P55096 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.83□□□□□ -0.36
Abcd3P55096 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abcd3P55096 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Abcd3P55096 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.83□□□□□ -0.36
Abcd3P55096 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.83□□□□□ -0.36
Abcd3P55096 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.83□□□□□ -0.36
Abcd3P55096 Rprl2-201ENSMUST00000157150 290 ntBASIC12.83□□□□□ -0.36
Abcd3P55096 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.83□□□□□ -0.36
Abcd3P55096 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.83□□□□□ -0.36
Abcd3P55096 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.83□□□□□ -0.36
Abcd3P55096 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.83□□□□□ -0.36
Abcd3P55096 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abcd3P55096 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Abcd3P55096 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abcd3P55096 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Abcd3P55096 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms