Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Msh6P54276 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Msh6P54276 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.07■□□□□ 0.48
Msh6P54276 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.07■□□□□ 0.48
Msh6P54276 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.07■□□□□ 0.48
Msh6P54276 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.07■□□□□ 0.48
Msh6P54276 Gm5356-201ENSMUST00000093326 615 ntBASIC18.07■□□□□ 0.48
Msh6P54276 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.07■□□□□ 0.48
Msh6P54276 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Msh6P54276 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.07■□□□□ 0.48
Msh6P54276 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.07■□□□□ 0.48
Msh6P54276 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Msh6P54276 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.07■□□□□ 0.48
Msh6P54276 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Msh6P54276 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Msh6P54276 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.07■□□□□ 0.48
Msh6P54276 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Msh6P54276 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.06■□□□□ 0.48
Msh6P54276 Gm44608-201ENSMUST00000206827 855 ntBASIC18.06■□□□□ 0.48
Msh6P54276 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Msh6P54276 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.06■□□□□ 0.48
Msh6P54276 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.06■□□□□ 0.48
Msh6P54276 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.06■□□□□ 0.48
Msh6P54276 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Msh6P54276 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Msh6P54276 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Msh6P54276 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Msh6P54276 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.05■□□□□ 0.48
Msh6P54276 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Msh6P54276 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Msh6P54276 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Mir1894-201ENSMUST00000122802 81 ntBASIC18.04■□□□□ 0.48
Msh6P54276 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.04■□□□□ 0.48
Msh6P54276 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Gm6244-201ENSMUST00000178732 841 ntBASIC18.04■□□□□ 0.48
Msh6P54276 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.04■□□□□ 0.48
Msh6P54276 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Gm7067-201ENSMUST00000207698 1249 ntBASIC18.04■□□□□ 0.48
Msh6P54276 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.04■□□□□ 0.48
Msh6P54276 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.04■□□□□ 0.48
Msh6P54276 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Msh6P54276 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
Msh6P54276 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.04■□□□□ 0.48
Msh6P54276 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Msh6P54276 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms