Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox1P53783 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Sox1P53783 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox1P53783 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox1P53783 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox1P53783 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Sox1P53783 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox1P53783 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Sox1P53783 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sox1P53783 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.58□□□□□ -0.08
Sox1P53783 Gm15376-201ENSMUST00000122258 783 ntBASIC14.58□□□□□ -0.08
Sox1P53783 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.58□□□□□ -0.08
Sox1P53783 Gm43133-201ENSMUST00000197472 463 ntBASIC14.58□□□□□ -0.08
Sox1P53783 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.58□□□□□ -0.08
Sox1P53783 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sox1P53783 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox1P53783 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Sox1P53783 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.57□□□□□ -0.08
Sox1P53783 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sox1P53783 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Sox1P53783 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.57□□□□□ -0.08
Sox1P53783 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.57□□□□□ -0.08
Sox1P53783 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox1P53783 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.57□□□□□ -0.08
Sox1P53783 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.57□□□□□ -0.08
Sox1P53783 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Sox1P53783 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox1P53783 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.57□□□□□ -0.08
Sox1P53783 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Sox1P53783 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox1P53783 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sox1P53783 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Gm24255-201ENSMUST00000104481 128 ntBASIC14.56□□□□□ -0.08
Sox1P53783 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.56□□□□□ -0.08
Sox1P53783 Gm12241-201ENSMUST00000118330 726 ntBASIC14.56□□□□□ -0.08
Sox1P53783 Gm11524-201ENSMUST00000119349 807 ntBASIC14.56□□□□□ -0.08
Sox1P53783 Gm1335-201ENSMUST00000121653 386 ntBASIC14.56□□□□□ -0.08
Sox1P53783 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.56□□□□□ -0.08
Sox1P53783 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Gm27331-201ENSMUST00000183705 60 ntBASIC14.56□□□□□ -0.08
Sox1P53783 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.56□□□□□ -0.08
Sox1P53783 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.56□□□□□ -0.08
Sox1P53783 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.56□□□□□ -0.08
Sox1P53783 Gm8099-201ENSMUST00000200510 742 ntBASIC14.56□□□□□ -0.08
Sox1P53783 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Sox1P53783 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Sox1P53783 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Sox1P53783 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sox1P53783 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms