Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lbx1P52955 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lbx1P52955 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lbx1P52955 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.85□□□□□ -0.19
Lbx1P52955 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.85□□□□□ -0.19
Lbx1P52955 Gm2991-201ENSMUST00000173338 480 ntBASIC13.85□□□□□ -0.19
Lbx1P52955 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.85□□□□□ -0.19
Lbx1P52955 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lbx1P52955 Gm43133-201ENSMUST00000197472 463 ntBASIC13.85□□□□□ -0.19
Lbx1P52955 Gm45098-201ENSMUST00000207179 657 ntBASIC13.85□□□□□ -0.19
Lbx1P52955 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.85□□□□□ -0.19
Lbx1P52955 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.85□□□□□ -0.19
Lbx1P52955 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lbx1P52955 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lbx1P52955 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.84□□□□□ -0.19
Lbx1P52955 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Gm10608-202ENSMUST00000213924 676 ntBASIC13.84□□□□□ -0.19
Lbx1P52955 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.84□□□□□ -0.19
Lbx1P52955 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.84□□□□□ -0.19
Lbx1P52955 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lbx1P52955 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lbx1P52955 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.84□□□□□ -0.19
Lbx1P52955 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Lbx1P52955 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lbx1P52955 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lbx1P52955 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lbx1P52955 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lbx1P52955 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lbx1P52955 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lbx1P52955 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lbx1P52955 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.83□□□□□ -0.2
Lbx1P52955 Gm8810-201ENSMUST00000172895 754 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 Gm20482-202ENSMUST00000174729 825 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.83□□□□□ -0.2
Lbx1P52955 Gm29396-201ENSMUST00000185659 716 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.83□□□□□ -0.2
Lbx1P52955 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.83□□□□□ -0.2
Lbx1P52955 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.83□□□□□ -0.2
Lbx1P52955 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lbx1P52955 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lbx1P52955 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.82□□□□□ -0.2
Lbx1P52955 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms