Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.37□□□□□ -0.27
Ptx3P48759 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.37□□□□□ -0.27
Ptx3P48759 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ptx3P48759 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.37□□□□□ -0.27
Ptx3P48759 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.37□□□□□ -0.27
Ptx3P48759 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ptx3P48759 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ptx3P48759 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ptx3P48759 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ptx3P48759 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ptx3P48759 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Gm27680-201ENSMUST00000184192 160 ntBASIC13.36□□□□□ -0.27
Ptx3P48759 Mir6977-201ENSMUST00000184960 64 ntBASIC13.36□□□□□ -0.27
Ptx3P48759 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Ptx3P48759 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ptx3P48759 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Ptx3P48759 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ptx3P48759 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ptx3P48759 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.36□□□□□ -0.27
Ptx3P48759 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ptx3P48759 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.35□□□□□ -0.27
Ptx3P48759 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ptx3P48759 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.35□□□□□ -0.27
Ptx3P48759 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ptx3P48759 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.35□□□□□ -0.27
Ptx3P48759 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Gm15653-201ENSMUST00000119247 907 ntBASIC13.35□□□□□ -0.27
Ptx3P48759 Gm12151-201ENSMUST00000121374 290 ntBASIC13.35□□□□□ -0.27
Ptx3P48759 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ptx3P48759 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Gm9063-201ENSMUST00000223299 582 ntBASIC13.35□□□□□ -0.27
Ptx3P48759 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Ptx3P48759 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.35□□□□□ -0.27
Ptx3P48759 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.35□□□□□ -0.27
Ptx3P48759 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.35□□□□□ -0.27
Ptx3P48759 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ptx3P48759 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ptx3P48759 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ptx3P48759 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Ptx3P48759 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptx3P48759 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ptx3P48759 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.34□□□□□ -0.27
Ptx3P48759 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptx3P48759 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ptx3P48759 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ptx3P48759 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms