Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.6□□□□□ -0.39
GdnfP48540 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.6□□□□□ -0.39
GdnfP48540 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.6□□□□□ -0.39
GdnfP48540 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.6□□□□□ -0.39
GdnfP48540 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
GdnfP48540 Gm18733-201ENSMUST00000173950 856 ntBASIC12.6□□□□□ -0.39
GdnfP48540 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Gm25007-201ENSMUST00000083808 133 ntBASIC12.6□□□□□ -0.39
GdnfP48540 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
GdnfP48540 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.6□□□□□ -0.39
GdnfP48540 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.6□□□□□ -0.39
GdnfP48540 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
GdnfP48540 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
GdnfP48540 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.6□□□□□ -0.39
GdnfP48540 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
GdnfP48540 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.59□□□□□ -0.39
GdnfP48540 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
GdnfP48540 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.59□□□□□ -0.39
GdnfP48540 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.59□□□□□ -0.39
GdnfP48540 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.59□□□□□ -0.39
GdnfP48540 Gm7787-201ENSMUST00000216858 688 ntBASIC12.59□□□□□ -0.39
GdnfP48540 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
GdnfP48540 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
GdnfP48540 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
GdnfP48540 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GdnfP48540 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GdnfP48540 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GdnfP48540 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
GdnfP48540 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
GdnfP48540 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
GdnfP48540 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
GdnfP48540 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.58□□□□□ -0.4
GdnfP48540 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
GdnfP48540 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.58□□□□□ -0.4
GdnfP48540 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.58□□□□□ -0.4
GdnfP48540 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.58□□□□□ -0.4
GdnfP48540 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.58□□□□□ -0.4
GdnfP48540 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GdnfP48540 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.58□□□□□ -0.4
GdnfP48540 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.57□□□□□ -0.4
GdnfP48540 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms