Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Xcl1P47993 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Xcl1P47993 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC9.32□□□□□ -0.92
Xcl1P47993 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Gm2559-201ENSMUST00000201323 363 ntBASIC9.32□□□□□ -0.92
Xcl1P47993 AC160980.1-201ENSMUST00000224136 970 ntBASIC9.32□□□□□ -0.92
Xcl1P47993 AC163280.1-201ENSMUST00000228194 1100 ntBASIC9.32□□□□□ -0.92
Xcl1P47993 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Xcl1P47993 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Xcl1P47993 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Xcl1P47993 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Xcl1P47993 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Xcl1P47993 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Xcl1P47993 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.32□□□□□ -0.92
Xcl1P47993 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC9.32□□□□□ -0.92
Xcl1P47993 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Xcl1P47993 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.31□□□□□ -0.92
Xcl1P47993 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Xcl1P47993 Gm12821-201ENSMUST00000120022 600 ntBASIC9.31□□□□□ -0.92
Xcl1P47993 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC9.31□□□□□ -0.92
Xcl1P47993 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Mxra8os-201ENSMUST00000097740 687 ntBASIC9.31□□□□□ -0.92
Xcl1P47993 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Xcl1P47993 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Xcl1P47993 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.31□□□□□ -0.92
Xcl1P47993 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Xcl1P47993 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.31□□□□□ -0.92
Xcl1P47993 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.31□□□□□ -0.92
Xcl1P47993 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Xcl1P47993 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC9.3□□□□□ -0.92
Xcl1P47993 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Xcl1P47993 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC9.3□□□□□ -0.92
Xcl1P47993 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Xcl1P47993 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Gm13158-201ENSMUST00000122007 736 ntBASIC9.3□□□□□ -0.92
Xcl1P47993 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Xcl1P47993 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms