Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.59□□□□□ -0.07
Vps4bP46467 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Vps4bP46467 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Vps4bP46467 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vps4bP46467 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.58□□□□□ -0.07
Vps4bP46467 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps4bP46467 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps4bP46467 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Vps4bP46467 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.58□□□□□ -0.08
Vps4bP46467 Gm26308-201ENSMUST00000157768 69 ntBASIC14.58□□□□□ -0.08
Vps4bP46467 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Vps4bP46467 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.58□□□□□ -0.08
Vps4bP46467 Gm45747-201ENSMUST00000212203 999 ntBASIC14.58□□□□□ -0.08
Vps4bP46467 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps4bP46467 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps4bP46467 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps4bP46467 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Vps4bP46467 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Vps4bP46467 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Vps4bP46467 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Vps4bP46467 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
Vps4bP46467 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.57□□□□□ -0.08
Vps4bP46467 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps4bP46467 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vps4bP46467 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps4bP46467 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vps4bP46467 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps4bP46467 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Vps4bP46467 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vps4bP46467 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps4bP46467 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps4bP46467 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms