Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Gm22189-201ENSMUST00000103822 86 ntBASIC13.59□□□□□ -0.23
Nkx2-6P43688 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.59□□□□□ -0.23
Nkx2-6P43688 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.59□□□□□ -0.23
Nkx2-6P43688 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.59□□□□□ -0.23
Nkx2-6P43688 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.59□□□□□ -0.23
Nkx2-6P43688 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.59□□□□□ -0.23
Nkx2-6P43688 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx2-6P43688 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Nkx2-6P43688 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.58□□□□□ -0.23
Nkx2-6P43688 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.58□□□□□ -0.23
Nkx2-6P43688 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.58□□□□□ -0.24
Nkx2-6P43688 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.58□□□□□ -0.24
Nkx2-6P43688 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-6P43688 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-6P43688 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nkx2-6P43688 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-6P43688 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-6P43688 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.56□□□□□ -0.24
Nkx2-6P43688 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-6P43688 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-6P43688 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms