Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.12■□□□□ 0.17
Sdc2P43407 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.12■□□□□ 0.17
Sdc2P43407 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.12■□□□□ 0.17
Sdc2P43407 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.12■□□□□ 0.17
Sdc2P43407 Gm15483-201ENSMUST00000120338 456 ntBASIC16.12■□□□□ 0.17
Sdc2P43407 Gm5479-201ENSMUST00000160578 435 ntBASIC16.12■□□□□ 0.17
Sdc2P43407 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.12■□□□□ 0.17
Sdc2P43407 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.12■□□□□ 0.17
Sdc2P43407 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Sdc2P43407 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.12■□□□□ 0.17
Sdc2P43407 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sdc2P43407 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.12■□□□□ 0.17
Sdc2P43407 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.11■□□□□ 0.17
Sdc2P43407 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.11■□□□□ 0.17
Sdc2P43407 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.11■□□□□ 0.17
Sdc2P43407 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.11■□□□□ 0.17
Sdc2P43407 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sdc2P43407 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sdc2P43407 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Sdc2P43407 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.11■□□□□ 0.17
Sdc2P43407 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Sdc2P43407 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.1■□□□□ 0.17
Sdc2P43407 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Sdc2P43407 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Sdc2P43407 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Sdc2P43407 Gm27741-201ENSMUST00000185060 237 ntBASIC16.1■□□□□ 0.17
Sdc2P43407 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.1■□□□□ 0.17
Sdc2P43407 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.1■□□□□ 0.17
Sdc2P43407 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sdc2P43407 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sdc2P43407 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sdc2P43407 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Sdc2P43407 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sdc2P43407 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.09■□□□□ 0.17
Sdc2P43407 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.09■□□□□ 0.17
Sdc2P43407 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.09■□□□□ 0.17
Sdc2P43407 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.09■□□□□ 0.17
Sdc2P43407 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.09■□□□□ 0.17
Sdc2P43407 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sdc2P43407 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sdc2P43407 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sdc2P43407 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sdc2P43407 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms