Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sox6P40645 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sox6P40645 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Sox6P40645 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.52□□□□□ -0.25
Sox6P40645 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sox6P40645 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox6P40645 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox6P40645 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.51□□□□□ -0.25
Sox6P40645 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sox6P40645 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.51□□□□□ -0.25
Sox6P40645 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sox6P40645 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Sox6P40645 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.51□□□□□ -0.25
Sox6P40645 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sox6P40645 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox6P40645 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.51□□□□□ -0.25
Sox6P40645 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sox6P40645 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox6P40645 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.51□□□□□ -0.25
Sox6P40645 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.5□□□□□ -0.25
Sox6P40645 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.5□□□□□ -0.25
Sox6P40645 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Sox6P40645 Gm12260-201ENSMUST00000122447 411 ntBASIC13.5□□□□□ -0.25
Sox6P40645 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Gm9727-201ENSMUST00000161387 555 ntBASIC13.5□□□□□ -0.25
Sox6P40645 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.5□□□□□ -0.25
Sox6P40645 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.5□□□□□ -0.25
Sox6P40645 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.5□□□□□ -0.25
Sox6P40645 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox6P40645 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.5□□□□□ -0.25
Sox6P40645 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.5□□□□□ -0.25
Sox6P40645 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sox6P40645 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Carlr-201ENSMUST00000181515 2574 ntBASIC13.5□□□□□ -0.25
Sox6P40645 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Sox6P40645 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Sox6P40645 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox6P40645 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox6P40645 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox6P40645 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox6P40645 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox6P40645 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox6P40645 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox6P40645 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Sox6P40645 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.49□□□□□ -0.25
Sox6P40645 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.49□□□□□ -0.25
Sox6P40645 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox6P40645 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms