Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm37714-201ENSMUST00000194742 342 ntBASIC14.69□□□□□ -0.06
Cxcl12P40224 Gm37466-201ENSMUST00000195692 652 ntBASIC14.69□□□□□ -0.06
Cxcl12P40224 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.69□□□□□ -0.06
Cxcl12P40224 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cxcl12P40224 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.69□□□□□ -0.06
Cxcl12P40224 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Gm16177-201ENSMUST00000120728 718 ntBASIC14.68□□□□□ -0.06
Cxcl12P40224 Gm15376-201ENSMUST00000122258 783 ntBASIC14.68□□□□□ -0.06
Cxcl12P40224 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Gm26464-201ENSMUST00000157094 305 ntBASIC14.68□□□□□ -0.06
Cxcl12P40224 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.68□□□□□ -0.06
Cxcl12P40224 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Gm19184-201ENSMUST00000196798 928 ntBASIC14.68□□□□□ -0.06
Cxcl12P40224 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.68□□□□□ -0.06
Cxcl12P40224 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cxcl12P40224 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cxcl12P40224 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm13350-201ENSMUST00000120519 479 ntBASIC14.67□□□□□ -0.06
Cxcl12P40224 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.67□□□□□ -0.06
Cxcl12P40224 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Mir3547-201ENSMUST00000175461 88 ntBASIC14.67□□□□□ -0.06
Cxcl12P40224 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.67□□□□□ -0.06
Cxcl12P40224 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.67□□□□□ -0.06
Cxcl12P40224 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm4857-201ENSMUST00000192718 785 ntBASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.67□□□□□ -0.06
Cxcl12P40224 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cxcl12P40224 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cxcl12P40224 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cxcl12P40224 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cxcl12P40224 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Cxcl12P40224 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.66□□□□□ -0.06
Cxcl12P40224 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.66□□□□□ -0.06
Cxcl12P40224 Gm44397-201ENSMUST00000195950 113 ntBASIC14.66□□□□□ -0.06
Cxcl12P40224 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cxcl12P40224 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cxcl12P40224 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cxcl12P40224 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.66□□□□□ -0.06
Cxcl12P40224 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms