Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs1P35441 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.29□□□□□ -0.28
Thbs1P35441 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Thbs1P35441 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.28□□□□□ -0.28
Thbs1P35441 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Thbs1P35441 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Thbs1P35441 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Thbs1P35441 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Thbs1P35441 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.28□□□□□ -0.28
Thbs1P35441 Gm14822-201ENSMUST00000122247 291 ntBASIC13.28□□□□□ -0.28
Thbs1P35441 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.28□□□□□ -0.28
Thbs1P35441 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.28□□□□□ -0.28
Thbs1P35441 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.28□□□□□ -0.28
Thbs1P35441 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.28□□□□□ -0.28
Thbs1P35441 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs1P35441 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Thbs1P35441 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thbs1P35441 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thbs1P35441 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Thbs1P35441 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Thbs1P35441 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.27□□□□□ -0.28
Thbs1P35441 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thbs1P35441 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.27□□□□□ -0.29
Thbs1P35441 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Thbs1P35441 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.27□□□□□ -0.29
Thbs1P35441 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.27□□□□□ -0.29
Thbs1P35441 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.27□□□□□ -0.29
Thbs1P35441 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.27□□□□□ -0.29
Thbs1P35441 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.27□□□□□ -0.29
Thbs1P35441 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Thbs1P35441 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Thbs1P35441 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.27□□□□□ -0.29
Thbs1P35441 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.27□□□□□ -0.29
Thbs1P35441 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Thbs1P35441 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Thbs1P35441 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Thbs1P35441 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.26□□□□□ -0.29
Thbs1P35441 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.26□□□□□ -0.29
Thbs1P35441 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.26□□□□□ -0.29
Thbs1P35441 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.26□□□□□ -0.29
Thbs1P35441 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Thbs1P35441 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.26□□□□□ -0.29
Thbs1P35441 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.26□□□□□ -0.29
Thbs1P35441 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms