Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.03□□□□□ -0.32
VtnP29788 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VtnP29788 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.03□□□□□ -0.32
VtnP29788 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.03□□□□□ -0.32
VtnP29788 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.03□□□□□ -0.32
VtnP29788 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.03□□□□□ -0.32
VtnP29788 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.03□□□□□ -0.32
VtnP29788 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
VtnP29788 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.03□□□□□ -0.32
VtnP29788 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VtnP29788 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
VtnP29788 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
VtnP29788 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
VtnP29788 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
VtnP29788 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
VtnP29788 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VtnP29788 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.02□□□□□ -0.33
VtnP29788 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.02□□□□□ -0.33
VtnP29788 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.02□□□□□ -0.33
VtnP29788 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VtnP29788 Gm38294-201ENSMUST00000192831 381 ntBASIC13.02□□□□□ -0.33
VtnP29788 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
VtnP29788 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.02□□□□□ -0.33
VtnP29788 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
VtnP29788 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.02□□□□□ -0.33
VtnP29788 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VtnP29788 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VtnP29788 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.02□□□□□ -0.33
VtnP29788 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.02□□□□□ -0.33
VtnP29788 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VtnP29788 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VtnP29788 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.01□□□□□ -0.33
VtnP29788 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
VtnP29788 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
VtnP29788 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Gm9824-201ENSMUST00000178707 561 ntBASIC13.01□□□□□ -0.33
VtnP29788 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.01□□□□□ -0.33
VtnP29788 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.01□□□□□ -0.33
VtnP29788 Gm27430-201ENSMUST00000184585 107 ntBASIC13.01□□□□□ -0.33
VtnP29788 Gm44333-201ENSMUST00000197168 107 ntBASIC13.01□□□□□ -0.33
VtnP29788 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VtnP29788 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VtnP29788 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.01□□□□□ -0.33
VtnP29788 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VtnP29788 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms