Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.27□□□□□ -0.28
Nedd8P29595 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd8P29595 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd8P29595 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd8P29595 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd8P29595 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.27□□□□□ -0.28
Nedd8P29595 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.27□□□□□ -0.28
Nedd8P29595 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd8P29595 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd8P29595 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nedd8P29595 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.27□□□□□ -0.28
Nedd8P29595 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Gm45058-201ENSMUST00000205810 766 ntBASIC13.27□□□□□ -0.29
Nedd8P29595 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Nedd8P29595 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.27□□□□□ -0.29
Nedd8P29595 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nedd8P29595 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nedd8P29595 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.27□□□□□ -0.29
Nedd8P29595 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nedd8P29595 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.27□□□□□ -0.29
Nedd8P29595 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.26□□□□□ -0.29
Nedd8P29595 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.26□□□□□ -0.29
Nedd8P29595 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nedd8P29595 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.26□□□□□ -0.29
Nedd8P29595 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.26□□□□□ -0.29
Nedd8P29595 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nedd8P29595 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.26□□□□□ -0.29
Nedd8P29595 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Nedd8P29595 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.26□□□□□ -0.29
Nedd8P29595 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.26□□□□□ -0.29
Nedd8P29595 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nedd8P29595 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.26□□□□□ -0.29
Nedd8P29595 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nedd8P29595 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nedd8P29595 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nedd8P29595 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nedd8P29595 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.25□□□□□ -0.29
Nedd8P29595 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Nedd8P29595 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.25□□□□□ -0.29
Nedd8P29595 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.25□□□□□ -0.29
Nedd8P29595 Gm10653-202ENSMUST00000139570 835 ntBASIC13.25□□□□□ -0.29
Nedd8P29595 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Nedd8P29595 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.25□□□□□ -0.29
Nedd8P29595 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.25□□□□□ -0.29
Nedd8P29595 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.25□□□□□ -0.29
Nedd8P29595 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.25□□□□□ -0.29
Nedd8P29595 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nedd8P29595 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms