Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Gm37917-201ENSMUST00000194711 392 ntBASIC15.34■□□□□ 0.05
Mmp3P28862 Gm8515-201ENSMUST00000194852 576 ntBASIC15.34■□□□□ 0.05
Mmp3P28862 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.34■□□□□ 0.05
Mmp3P28862 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Mmp3P28862 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Mmp3P28862 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Mmp3P28862 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Mmp3P28862 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Mmp3P28862 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Mmp3P28862 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Mmp3P28862 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Mmp3P28862 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Mmp3P28862 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Mmp3P28862 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.33■□□□□ 0.05
Mmp3P28862 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Mmp3P28862 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.33■□□□□ 0.04
Mmp3P28862 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.33■□□□□ 0.04
Mmp3P28862 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Mmp3P28862 Gm18018-201ENSMUST00000198273 408 ntBASIC15.33■□□□□ 0.04
Mmp3P28862 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.33■□□□□ 0.04
Mmp3P28862 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Mmp3P28862 Gm45668-201ENSMUST00000211271 493 ntBASIC15.33■□□□□ 0.04
Mmp3P28862 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.33■□□□□ 0.04
Mmp3P28862 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Mmp3P28862 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.32■□□□□ 0.04
Mmp3P28862 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Mmp3P28862 Gm6912-201ENSMUST00000117218 544 ntBASIC15.32■□□□□ 0.04
Mmp3P28862 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mmp3P28862 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.32■□□□□ 0.04
Mmp3P28862 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.32■□□□□ 0.04
Mmp3P28862 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Gm15823-201ENSMUST00000064305 670 ntBASIC15.32■□□□□ 0.04
Mmp3P28862 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Mmp3P28862 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.32■□□□□ 0.04
Mmp3P28862 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.32■□□□□ 0.04
Mmp3P28862 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Mmp3P28862 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Mmp3P28862 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.31■□□□□ 0.04
Mmp3P28862 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Mmp3P28862 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.31■□□□□ 0.04
Mmp3P28862 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.31■□□□□ 0.04
Mmp3P28862 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.31■□□□□ 0.04
Mmp3P28862 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.31■□□□□ 0.04
Mmp3P28862 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.31■□□□□ 0.04
Mmp3P28862 Gm12091-201ENSMUST00000146791 830 ntBASIC15.31■□□□□ 0.04
Mmp3P28862 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.31■□□□□ 0.04
Mmp3P28862 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.31■□□□□ 0.04
Mmp3P28862 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.31■□□□□ 0.04
Mmp3P28862 Gm18624-201ENSMUST00000220966 658 ntBASIC15.31■□□□□ 0.04
Mmp3P28862 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.31■□□□□ 0.04
Mmp3P28862 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.31■□□□□ 0.04
Mmp3P28862 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.31■□□□□ 0.04
Mmp3P28862 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Mmp3P28862 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms