Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.43□□□□□ -0.1
RxrbP28704 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RxrbP28704 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.43□□□□□ -0.1
RxrbP28704 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.43□□□□□ -0.1
RxrbP28704 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.43□□□□□ -0.1
RxrbP28704 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RxrbP28704 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.43□□□□□ -0.1
RxrbP28704 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.43□□□□□ -0.1
RxrbP28704 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.43□□□□□ -0.1
RxrbP28704 Gm2451-201ENSMUST00000199447 999 ntBASIC14.43□□□□□ -0.1
RxrbP28704 Gm10290-201ENSMUST00000200451 999 ntBASIC14.43□□□□□ -0.1
RxrbP28704 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.43□□□□□ -0.1
RxrbP28704 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.43□□□□□ -0.1
RxrbP28704 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RxrbP28704 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RxrbP28704 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.42□□□□□ -0.1
RxrbP28704 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RxrbP28704 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.42□□□□□ -0.1
RxrbP28704 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RxrbP28704 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.42□□□□□ -0.1
RxrbP28704 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RxrbP28704 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RxrbP28704 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RxrbP28704 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.42□□□□□ -0.1
RxrbP28704 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RxrbP28704 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RxrbP28704 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RxrbP28704 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.41□□□□□ -0.1
RxrbP28704 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RxrbP28704 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RxrbP28704 Gm7862-201ENSMUST00000121461 292 ntBASIC14.41□□□□□ -0.1
RxrbP28704 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Gm6550-201ENSMUST00000187574 993 ntBASIC14.41□□□□□ -0.1
RxrbP28704 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.41□□□□□ -0.1
RxrbP28704 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.41□□□□□ -0.1
RxrbP28704 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RxrbP28704 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RxrbP28704 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RxrbP28704 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms