Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13□□□□□ -0.33
Cd40P27512 Gm5566-201ENSMUST00000116118 459 ntBASIC13□□□□□ -0.33
Cd40P27512 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13□□□□□ -0.33
Cd40P27512 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13□□□□□ -0.33
Cd40P27512 Gm9719-201ENSMUST00000162765 543 ntBASIC13□□□□□ -0.33
Cd40P27512 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Gm5779-201ENSMUST00000218467 910 ntBASIC13□□□□□ -0.33
Cd40P27512 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cd40P27512 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Cd40P27512 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cd40P27512 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cd40P27512 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cd40P27512 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cd40P27512 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd40P27512 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.99□□□□□ -0.33
Cd40P27512 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cd40P27512 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.99□□□□□ -0.33
Cd40P27512 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.99□□□□□ -0.33
Cd40P27512 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.99□□□□□ -0.33
Cd40P27512 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.99□□□□□ -0.33
Cd40P27512 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Cd40P27512 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cd40P27512 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Gm45453-201ENSMUST00000211758 853 ntBASIC12.99□□□□□ -0.33
Cd40P27512 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cd40P27512 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd40P27512 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Cd40P27512 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cd40P27512 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cd40P27512 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.98□□□□□ -0.33
Cd40P27512 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cd40P27512 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cd40P27512 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cd40P27512 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cd40P27512 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cd40P27512 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.98□□□□□ -0.33
Cd40P27512 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.98□□□□□ -0.33
Cd40P27512 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cd40P27512 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.98□□□□□ -0.33
Cd40P27512 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.98□□□□□ -0.33
Cd40P27512 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.98□□□□□ -0.33
Cd40P27512 Gm27631-201ENSMUST00000184163 466 ntBASIC12.98□□□□□ -0.33
Cd40P27512 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.98□□□□□ -0.33
Cd40P27512 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cd40P27512 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.98□□□□□ -0.33
Cd40P27512 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd40P27512 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms