Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RaraP11416 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RaraP11416 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RaraP11416 Matn2-206ENSMUST00000228570 2798 ntBASIC15.54■□□□□ 0.08
RaraP11416 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.54■□□□□ 0.08
RaraP11416 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RaraP11416 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RaraP11416 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RaraP11416 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RaraP11416 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RaraP11416 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RaraP11416 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RaraP11416 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.53■□□□□ 0.08
RaraP11416 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RaraP11416 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RaraP11416 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RaraP11416 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.53■□□□□ 0.08
RaraP11416 Gm18733-201ENSMUST00000173950 856 ntBASIC15.53■□□□□ 0.08
RaraP11416 Rpph1-201ENSMUST00000175096 319 ntBASIC15.53■□□□□ 0.08
RaraP11416 Gm44492-201ENSMUST00000197012 141 ntBASIC15.53■□□□□ 0.08
RaraP11416 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.53■□□□□ 0.08
RaraP11416 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RaraP11416 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RaraP11416 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.52■□□□□ 0.08
RaraP11416 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.52■□□□□ 0.08
RaraP11416 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Gm10275-202ENSMUST00000168697 495 ntBASIC15.52■□□□□ 0.08
RaraP11416 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.52■□□□□ 0.08
RaraP11416 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.52■□□□□ 0.08
RaraP11416 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RaraP11416 Gm10275-201ENSMUST00000092620 635 ntBASIC15.52■□□□□ 0.08
RaraP11416 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RaraP11416 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RaraP11416 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RaraP11416 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RaraP11416 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RaraP11416 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RaraP11416 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
RaraP11416 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
RaraP11416 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RaraP11416 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RaraP11416 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.51■□□□□ 0.07
RaraP11416 Gm27920-201ENSMUST00000183953 96 ntBASIC15.51■□□□□ 0.07
RaraP11416 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.51■□□□□ 0.07
RaraP11416 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.51■□□□□ 0.07
RaraP11416 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RaraP11416 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.51■□□□□ 0.07
RaraP11416 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms