Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ApoeP08226 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ApoeP08226 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ApoeP08226 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ApoeP08226 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.59□□□□□ -0.23
ApoeP08226 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ApoeP08226 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Gm25990-201ENSMUST00000102440 86 ntBASIC13.59□□□□□ -0.23
ApoeP08226 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ApoeP08226 Gm33142-201ENSMUST00000193913 867 ntBASIC13.59□□□□□ -0.23
ApoeP08226 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
ApoeP08226 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ApoeP08226 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
ApoeP08226 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ApoeP08226 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
ApoeP08226 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.59□□□□□ -0.23
ApoeP08226 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ApoeP08226 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ApoeP08226 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ApoeP08226 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ApoeP08226 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.58□□□□□ -0.24
ApoeP08226 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ApoeP08226 Gm44357-201ENSMUST00000195897 142 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm19658-201ENSMUST00000196231 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44367-201ENSMUST00000196836 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44350-201ENSMUST00000197197 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44390-201ENSMUST00000197533 144 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44313-201ENSMUST00000198018 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44486-201ENSMUST00000198508 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44314-201ENSMUST00000199263 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44394-201ENSMUST00000199558 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44484-201ENSMUST00000199873 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44466-201ENSMUST00000200264 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm44359-201ENSMUST00000200671 138 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.58□□□□□ -0.24
ApoeP08226 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.58□□□□□ -0.24
ApoeP08226 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ApoeP08226 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ApoeP08226 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.58□□□□□ -0.24
ApoeP08226 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ApoeP08226 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ApoeP08226 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
ApoeP08226 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ApoeP08226 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ApoeP08226 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms