Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa4P06798 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxa4P06798 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.12□□□□□ -0.15
Hoxa4P06798 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa4P06798 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa4P06798 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.12□□□□□ -0.15
Hoxa4P06798 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa4P06798 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa4P06798 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa4P06798 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxa4P06798 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa4P06798 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxa4P06798 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxa4P06798 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.11□□□□□ -0.15
Hoxa4P06798 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.11□□□□□ -0.15
Hoxa4P06798 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hoxa4P06798 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hoxa4P06798 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxa4P06798 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxa4P06798 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxa4P06798 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxa4P06798 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxa4P06798 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hoxa4P06798 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hoxa4P06798 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.1□□□□□ -0.15
Hoxa4P06798 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxa4P06798 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxa4P06798 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Hoxa4P06798 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxa4P06798 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hoxa4P06798 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Hoxa4P06798 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.09□□□□□ -0.15
Hoxa4P06798 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.09□□□□□ -0.15
Hoxa4P06798 Mir7684-201ENSMUST00000183858 60 ntBASIC14.09□□□□□ -0.15
Hoxa4P06798 Gm33320-201ENSMUST00000192232 530 ntBASIC14.09□□□□□ -0.15
Hoxa4P06798 Gm43703-201ENSMUST00000200523 763 ntBASIC14.09□□□□□ -0.15
Hoxa4P06798 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hoxa4P06798 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxa4P06798 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms