Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.82□□□□□ -0.04
PrnpP04925 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Gm18905-201ENSMUST00000205454 928 ntBASIC14.82□□□□□ -0.04
PrnpP04925 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrnpP04925 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PrnpP04925 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PrnpP04925 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PrnpP04925 Gm18027-201ENSMUST00000218947 619 ntBASIC14.81□□□□□ -0.04
PrnpP04925 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PrnpP04925 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PrnpP04925 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.81□□□□□ -0.04
PrnpP04925 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PrnpP04925 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PrnpP04925 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
PrnpP04925 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.81□□□□□ -0.04
PrnpP04925 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PrnpP04925 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PrnpP04925 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.8□□□□□ -0.04
PrnpP04925 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.8□□□□□ -0.04
PrnpP04925 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.8□□□□□ -0.04
PrnpP04925 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.8□□□□□ -0.04
PrnpP04925 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.8□□□□□ -0.04
PrnpP04925 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.8□□□□□ -0.04
PrnpP04925 Gm17794-201ENSMUST00000220252 955 ntBASIC14.8□□□□□ -0.04
PrnpP04925 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PrnpP04925 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PrnpP04925 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PrnpP04925 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.8□□□□□ -0.04
PrnpP04925 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.8□□□□□ -0.04
PrnpP04925 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.8□□□□□ -0.04
PrnpP04925 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PrnpP04925 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.8□□□□□ -0.04
PrnpP04925 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PrnpP04925 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PrnpP04925 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PrnpP04925 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PrnpP04925 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms