Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.5□□□□□ -0.73
TcraP01849 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.5□□□□□ -0.73
TcraP01849 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.5□□□□□ -0.73
TcraP01849 Gm14859-201ENSMUST00000117752 357 ntBASIC10.5□□□□□ -0.73
TcraP01849 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.5□□□□□ -0.73
TcraP01849 Gm15794-201ENSMUST00000120182 631 ntBASIC10.5□□□□□ -0.73
TcraP01849 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.5□□□□□ -0.73
TcraP01849 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
TcraP01849 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.5□□□□□ -0.73
TcraP01849 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC10.5□□□□□ -0.73
TcraP01849 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.5□□□□□ -0.73
TcraP01849 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
TcraP01849 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.5□□□□□ -0.73
TcraP01849 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
TcraP01849 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.5□□□□□ -0.73
TcraP01849 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
TcraP01849 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TcraP01849 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.49□□□□□ -0.73
TcraP01849 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
TcraP01849 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.49□□□□□ -0.73
TcraP01849 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
TcraP01849 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TcraP01849 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Gm27742-201ENSMUST00000184667 60 ntBASIC10.49□□□□□ -0.73
TcraP01849 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.49□□□□□ -0.73
TcraP01849 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.49□□□□□ -0.73
TcraP01849 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.49□□□□□ -0.73
TcraP01849 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TcraP01849 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TcraP01849 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
TcraP01849 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TcraP01849 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
TcraP01849 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TcraP01849 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms