Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.27□□□□□ -0.28
Cops4O88544 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.27□□□□□ -0.28
Cops4O88544 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.27□□□□□ -0.28
Cops4O88544 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cops4O88544 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cops4O88544 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops4O88544 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops4O88544 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.27□□□□□ -0.29
Cops4O88544 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.27□□□□□ -0.29
Cops4O88544 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.27□□□□□ -0.29
Cops4O88544 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops4O88544 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops4O88544 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops4O88544 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.27□□□□□ -0.29
Cops4O88544 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cops4O88544 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops4O88544 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops4O88544 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cops4O88544 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops4O88544 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.27□□□□□ -0.29
Cops4O88544 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.26□□□□□ -0.29
Cops4O88544 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.26□□□□□ -0.29
Cops4O88544 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.26□□□□□ -0.29
Cops4O88544 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.26□□□□□ -0.29
Cops4O88544 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.26□□□□□ -0.29
Cops4O88544 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.26□□□□□ -0.29
Cops4O88544 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops4O88544 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.25□□□□□ -0.29
Cops4O88544 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.25□□□□□ -0.29
Cops4O88544 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cops4O88544 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.25□□□□□ -0.29
Cops4O88544 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.25□□□□□ -0.29
Cops4O88544 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cops4O88544 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.25□□□□□ -0.29
Cops4O88544 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cops4O88544 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.25□□□□□ -0.29
Cops4O88544 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.25□□□□□ -0.29
Cops4O88544 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.25□□□□□ -0.29
Cops4O88544 Gm27459-201ENSMUST00000184860 107 ntBASIC13.25□□□□□ -0.29
Cops4O88544 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.25□□□□□ -0.29
Cops4O88544 Birc2-201ENSMUST00000054878 378 ntBASIC13.25□□□□□ -0.29
Cops4O88544 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops4O88544 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms