Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col5a1O88207 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col5a1O88207 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Col5a1O88207 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Col5a1O88207 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col5a1O88207 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Col5a1O88207 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.77□□□□□ -0.36
Col5a1O88207 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col5a1O88207 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Col5a1O88207 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col5a1O88207 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.77□□□□□ -0.36
Col5a1O88207 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Col5a1O88207 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Gm11814-201ENSMUST00000119515 929 ntBASIC12.77□□□□□ -0.37
Col5a1O88207 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Gm16570-201ENSMUST00000161951 436 ntBASIC12.77□□□□□ -0.37
Col5a1O88207 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.77□□□□□ -0.37
Col5a1O88207 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.77□□□□□ -0.37
Col5a1O88207 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.77□□□□□ -0.37
Col5a1O88207 Gm18905-201ENSMUST00000205454 928 ntBASIC12.77□□□□□ -0.37
Col5a1O88207 Gm19078-201ENSMUST00000206311 727 ntBASIC12.77□□□□□ -0.37
Col5a1O88207 Gm6013-201ENSMUST00000212264 699 ntBASIC12.77□□□□□ -0.37
Col5a1O88207 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col5a1O88207 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col5a1O88207 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Col5a1O88207 Gm15240-201ENSMUST00000118156 720 ntBASIC12.76□□□□□ -0.37
Col5a1O88207 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.76□□□□□ -0.37
Col5a1O88207 Gm43822-201ENSMUST00000200285 476 ntBASIC12.76□□□□□ -0.37
Col5a1O88207 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.76□□□□□ -0.37
Col5a1O88207 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col5a1O88207 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Col5a1O88207 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col5a1O88207 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.76□□□□□ -0.37
Col5a1O88207 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col5a1O88207 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.76□□□□□ -0.37
Col5a1O88207 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.76□□□□□ -0.37
Col5a1O88207 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.76□□□□□ -0.37
Col5a1O88207 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.76□□□□□ -0.37
Col5a1O88207 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col5a1O88207 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col5a1O88207 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col5a1O88207 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.76□□□□□ -0.37
Col5a1O88207 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Col5a1O88207 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm12134-201ENSMUST00000122109 520 ntBASIC12.75□□□□□ -0.37
Col5a1O88207 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.75□□□□□ -0.37
Col5a1O88207 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.75□□□□□ -0.37
Col5a1O88207 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.75□□□□□ -0.37
Col5a1O88207 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.75□□□□□ -0.37
Col5a1O88207 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.75□□□□□ -0.37
Col5a1O88207 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms