Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim1O70400 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim1O70400 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Gm8410-201ENSMUST00000117225 605 ntBASIC14.19□□□□□ -0.14
Pdlim1O70400 Gm15920-201ENSMUST00000118998 402 ntBASIC14.19□□□□□ -0.14
Pdlim1O70400 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.19□□□□□ -0.14
Pdlim1O70400 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Gm27622-201ENSMUST00000183779 60 ntBASIC14.19□□□□□ -0.14
Pdlim1O70400 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.19□□□□□ -0.14
Pdlim1O70400 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim1O70400 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.19□□□□□ -0.14
Pdlim1O70400 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim1O70400 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim1O70400 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim1O70400 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim1O70400 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Pdlim1O70400 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.18□□□□□ -0.14
Pdlim1O70400 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.18□□□□□ -0.14
Pdlim1O70400 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Gm24543-201ENSMUST00000103867 82 ntBASIC14.18□□□□□ -0.14
Pdlim1O70400 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.18□□□□□ -0.14
Pdlim1O70400 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pdlim1O70400 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pdlim1O70400 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Pdlim1O70400 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pdlim1O70400 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pdlim1O70400 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim1O70400 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pdlim1O70400 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pdlim1O70400 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pdlim1O70400 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pdlim1O70400 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Pdlim1O70400 Gm15957-201ENSMUST00000118893 974 ntBASIC14.17□□□□□ -0.14
Pdlim1O70400 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Gm44608-201ENSMUST00000206827 855 ntBASIC14.17□□□□□ -0.14
Pdlim1O70400 Gm44872-201ENSMUST00000207864 420 ntBASIC14.17□□□□□ -0.14
Pdlim1O70400 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.17□□□□□ -0.14
Pdlim1O70400 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.17□□□□□ -0.14
Pdlim1O70400 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pdlim1O70400 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pdlim1O70400 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim1O70400 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdlim1O70400 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pdlim1O70400 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms