Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm10275-201ENSMUST00000092620 635 ntBASIC15.81■□□□□ 0.12
Sptlc1O35704 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sptlc1O35704 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sptlc1O35704 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sptlc1O35704 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sptlc1O35704 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Gm28975-201ENSMUST00000186412 686 ntBASIC15.8■□□□□ 0.12
Sptlc1O35704 Gm28923-201ENSMUST00000187755 322 ntBASIC15.8■□□□□ 0.12
Sptlc1O35704 Gm43066-201ENSMUST00000199589 1260 ntBASIC15.8■□□□□ 0.12
Sptlc1O35704 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Gm6916-202ENSMUST00000205523 195 ntBASIC15.8■□□□□ 0.12
Sptlc1O35704 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 AC132881.2-201ENSMUST00000225474 709 ntBASIC15.8■□□□□ 0.12
Sptlc1O35704 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.8■□□□□ 0.12
Sptlc1O35704 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.8■□□□□ 0.12
Sptlc1O35704 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.8■□□□□ 0.12
Sptlc1O35704 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sptlc1O35704 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.79■□□□□ 0.12
Sptlc1O35704 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Gm6912-201ENSMUST00000117218 544 ntBASIC15.79■□□□□ 0.12
Sptlc1O35704 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.79■□□□□ 0.12
Sptlc1O35704 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.79■□□□□ 0.12
Sptlc1O35704 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Gm6180-201ENSMUST00000065243 498 ntBASIC15.79■□□□□ 0.12
Sptlc1O35704 Gm10478-201ENSMUST00000084451 396 ntBASIC15.79■□□□□ 0.12
Sptlc1O35704 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.79■□□□□ 0.12
Sptlc1O35704 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sptlc1O35704 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sptlc1O35704 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sptlc1O35704 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sptlc1O35704 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms