Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.17□□□□□ -0.14
Slc1a6O35544 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Slc1a6O35544 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Slc1a6O35544 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc1a6O35544 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.16□□□□□ -0.14
Slc1a6O35544 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.16□□□□□ -0.14
Slc1a6O35544 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.16□□□□□ -0.14
Slc1a6O35544 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Slc1a6O35544 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Gm6376-201ENSMUST00000209407 580 ntBASIC14.16□□□□□ -0.14
Slc1a6O35544 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Birc2-201ENSMUST00000054878 378 ntBASIC14.16□□□□□ -0.14
Slc1a6O35544 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc1a6O35544 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc1a6O35544 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Slc1a6O35544 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.15□□□□□ -0.14
Slc1a6O35544 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Slc1a6O35544 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Slc1a6O35544 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Slc1a6O35544 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Slc1a6O35544 Gm15173-201ENSMUST00000122049 433 ntBASIC14.15□□□□□ -0.14
Slc1a6O35544 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.15□□□□□ -0.14
Slc1a6O35544 Gm16026-204ENSMUST00000162652 683 ntBASIC14.15□□□□□ -0.14
Slc1a6O35544 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.15□□□□□ -0.14
Slc1a6O35544 Gm43347-201ENSMUST00000200226 580 ntBASIC14.15□□□□□ -0.14
Slc1a6O35544 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Rps4l-201ENSMUST00000071745 943 ntBASIC14.15□□□□□ -0.14
Slc1a6O35544 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.15□□□□□ -0.14
Slc1a6O35544 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc1a6O35544 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Slc1a6O35544 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.14□□□□□ -0.15
Slc1a6O35544 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.14□□□□□ -0.15
Slc1a6O35544 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Slc1a6O35544 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.14□□□□□ -0.15
Slc1a6O35544 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc1a6O35544 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms