Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.15□□□□□ -0.47
Prrt1O35449 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prrt1O35449 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prrt1O35449 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prrt1O35449 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.14□□□□□ -0.47
Prrt1O35449 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.14□□□□□ -0.47
Prrt1O35449 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.14□□□□□ -0.47
Prrt1O35449 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Prrt1O35449 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prrt1O35449 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Prrt1O35449 Gm29518-201ENSMUST00000190858 372 ntBASIC12.14□□□□□ -0.47
Prrt1O35449 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Prrt1O35449 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.14□□□□□ -0.47
Prrt1O35449 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prrt1O35449 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.14□□□□□ -0.47
Prrt1O35449 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Prrt1O35449 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prrt1O35449 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prrt1O35449 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.14□□□□□ -0.47
Prrt1O35449 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.14□□□□□ -0.47
Prrt1O35449 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prrt1O35449 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.14□□□□□ -0.47
Prrt1O35449 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Prrt1O35449 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.13□□□□□ -0.47
Prrt1O35449 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.13□□□□□ -0.47
Prrt1O35449 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.13□□□□□ -0.47
Prrt1O35449 Gm18489-201ENSMUST00000172565 551 ntBASIC12.13□□□□□ -0.47
Prrt1O35449 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.13□□□□□ -0.47
Prrt1O35449 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Prrt1O35449 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.13□□□□□ -0.47
Prrt1O35449 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Prrt1O35449 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Prrt1O35449 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.13□□□□□ -0.47
Prrt1O35449 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Prrt1O35449 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prrt1O35449 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.12□□□□□ -0.47
Prrt1O35449 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Prrt1O35449 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Prrt1O35449 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Prrt1O35449 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Prrt1O35449 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Prrt1O35449 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Prrt1O35449 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.12□□□□□ -0.47
Prrt1O35449 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Prrt1O35449 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms