Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.13□□□□□ -0.15
Bhlhe40O35185 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Gm6916-202ENSMUST00000205523 195 ntBASIC14.12□□□□□ -0.15
Bhlhe40O35185 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.12□□□□□ -0.15
Bhlhe40O35185 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Bhlhe40O35185 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.12□□□□□ -0.15
Bhlhe40O35185 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Bhlhe40O35185 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.11□□□□□ -0.15
Bhlhe40O35185 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.11□□□□□ -0.15
Bhlhe40O35185 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.11□□□□□ -0.15
Bhlhe40O35185 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.11□□□□□ -0.15
Bhlhe40O35185 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.11□□□□□ -0.15
Bhlhe40O35185 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Bhlhe40O35185 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.1□□□□□ -0.15
Bhlhe40O35185 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Bhlhe40O35185 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms