Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Polr1aO35134 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Polr1aO35134 Gm44974-201ENSMUST00000206387 1279 ntBASIC21.71■■□□□ 1.07
Polr1aO35134 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr1aO35134 Gm26917-202ENSMUST00000192833 3329 ntBASIC21.71■■□□□ 1.07
Polr1aO35134 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Polr1aO35134 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr1aO35134 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr1aO35134 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Polr1aO35134 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Polr1aO35134 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC21.7■■□□□ 1.06
Polr1aO35134 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Polr1aO35134 Gm19184-201ENSMUST00000196798 928 ntBASIC21.7■■□□□ 1.06
Polr1aO35134 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Polr1aO35134 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Polr1aO35134 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Polr1aO35134 Gm18222-201ENSMUST00000202416 1387 ntBASIC21.7■■□□□ 1.06
Polr1aO35134 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr1aO35134 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Gm8584-201ENSMUST00000171982 758 ntBASIC21.69■■□□□ 1.06
Polr1aO35134 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC21.69■■□□□ 1.06
Polr1aO35134 Gm18934-201ENSMUST00000216671 1044 ntBASIC21.69■■□□□ 1.06
Polr1aO35134 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Gm44981-201ENSMUST00000205549 1943 ntBASIC21.69■■□□□ 1.06
Polr1aO35134 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC21.69■■□□□ 1.06
Polr1aO35134 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Gm8565-201ENSMUST00000183259 1014 ntBASIC21.69■■□□□ 1.06
Polr1aO35134 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Polr1aO35134 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Polr1aO35134 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC21.69■■□□□ 1.06
Polr1aO35134 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC21.68■■□□□ 1.06
Polr1aO35134 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Polr1aO35134 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC21.68■■□□□ 1.06
Polr1aO35134 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC21.68■■□□□ 1.06
Polr1aO35134 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC21.68■■□□□ 1.06
Polr1aO35134 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Gm5940-201ENSMUST00000117582 1068 ntBASIC21.68■■□□□ 1.06
Polr1aO35134 Gm12384-201ENSMUST00000119228 919 ntBASIC21.68■■□□□ 1.06
Polr1aO35134 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Polr1aO35134 Gm42929-201ENSMUST00000198374 1286 ntBASIC21.68■■□□□ 1.06
Polr1aO35134 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Gm7399-201ENSMUST00000032395 858 ntBASIC21.68■■□□□ 1.06
Polr1aO35134 Gm44645-201ENSMUST00000205492 1653 ntBASIC21.68■■□□□ 1.06
Polr1aO35134 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr1aO35134 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Polr1aO35134 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Gm7172-201ENSMUST00000218047 1152 ntBASIC21.67■■□□□ 1.06
Polr1aO35134 AC155237.1-201ENSMUST00000226196 1279 ntBASIC21.67■■□□□ 1.06
Polr1aO35134 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Polr1aO35134 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC21.67■■□□□ 1.06
Polr1aO35134 Efs-202ENSMUST00000227037 2540 ntBASIC21.67■■□□□ 1.06
Polr1aO35134 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr1aO35134 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Polr1aO35134 Gm2639-201ENSMUST00000156881 1297 ntBASIC21.66■■□□□ 1.06
Polr1aO35134 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Polr1aO35134 Gm8801-201ENSMUST00000173255 1064 ntBASIC21.66■■□□□ 1.06
Polr1aO35134 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC21.66■■□□□ 1.06
Polr1aO35134 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr1aO35134 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr1aO35134 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr1aO35134 Gm10339-203ENSMUST00000225409 1671 ntBASIC21.66■■□□□ 1.06
Polr1aO35134 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr1aO35134 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms