Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2b3O09039 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2b3O09039 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Sh2b3O09039 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2b3O09039 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sh2b3O09039 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.8□□□□□ -0.36
Sh2b3O09039 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.8□□□□□ -0.36
Sh2b3O09039 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Gm27618-201ENSMUST00000183671 60 ntBASIC12.79□□□□□ -0.36
Sh2b3O09039 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.79□□□□□ -0.36
Sh2b3O09039 Gm18049-201ENSMUST00000208909 581 ntBASIC12.79□□□□□ -0.36
Sh2b3O09039 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.79□□□□□ -0.36
Sh2b3O09039 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Sh2b3O09039 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh2b3O09039 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.78□□□□□ -0.36
Sh2b3O09039 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.78□□□□□ -0.36
Sh2b3O09039 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.78□□□□□ -0.36
Sh2b3O09039 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.78□□□□□ -0.36
Sh2b3O09039 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh2b3O09039 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sh2b3O09039 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sh2b3O09039 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Sh2b3O09039 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Sh2b3O09039 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh2b3O09039 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms