Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim55G3X8Y1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim55G3X8Y1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Gm10013-201ENSMUST00000106074 672 ntBASIC14.76□□□□□ -0.05
Trim55G3X8Y1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Gm18032-201ENSMUST00000222541 538 ntBASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim55G3X8Y1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Gm2274-201ENSMUST00000184539 609 ntBASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim55G3X8Y1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim55G3X8Y1 Gm23634-201ENSMUST00000175071 91 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms