Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.23■□□□□ 0.35
NpcdF8VQB8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 BC001981-202ENSMUST00000191393 1545 ntBASIC17.23■□□□□ 0.35
NpcdF8VQB8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Gm7561-201ENSMUST00000211203 886 ntBASIC17.23■□□□□ 0.35
NpcdF8VQB8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.23■□□□□ 0.35
NpcdF8VQB8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NpcdF8VQB8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.22■□□□□ 0.35
NpcdF8VQB8 Mir3547-201ENSMUST00000175461 88 ntBASIC17.22■□□□□ 0.35
NpcdF8VQB8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.22■□□□□ 0.35
NpcdF8VQB8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Gm9182-201ENSMUST00000217829 639 ntBASIC17.22■□□□□ 0.35
NpcdF8VQB8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NpcdF8VQB8 Celf4-206ENSMUST00000224553 1729 ntBASIC17.21■□□□□ 0.35
NpcdF8VQB8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.21■□□□□ 0.35
NpcdF8VQB8 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.21■□□□□ 0.35
NpcdF8VQB8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NpcdF8VQB8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.21■□□□□ 0.35
NpcdF8VQB8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NpcdF8VQB8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.2■□□□□ 0.34
NpcdF8VQB8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms