Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Gm9002-201ENSMUST00000178437 499 ntBASIC17.17■□□□□ 0.34
Ube4aE9Q735 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Gm28911-201ENSMUST00000188837 117 ntBASIC17.17■□□□□ 0.34
Ube4aE9Q735 Gm18905-201ENSMUST00000205454 928 ntBASIC17.17■□□□□ 0.34
Ube4aE9Q735 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.17■□□□□ 0.34
Ube4aE9Q735 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.17■□□□□ 0.34
Ube4aE9Q735 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ube4aE9Q735 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.16■□□□□ 0.34
Ube4aE9Q735 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Gm8602-201ENSMUST00000184045 607 ntBASIC17.16■□□□□ 0.34
Ube4aE9Q735 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ube4aE9Q735 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.16■□□□□ 0.34
Ube4aE9Q735 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.15■□□□□ 0.34
Ube4aE9Q735 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.15■□□□□ 0.34
Ube4aE9Q735 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.15■□□□□ 0.34
Ube4aE9Q735 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.15■□□□□ 0.34
Ube4aE9Q735 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.15■□□□□ 0.34
Ube4aE9Q735 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Gm25857-201ENSMUST00000082788 129 ntBASIC17.15■□□□□ 0.34
Ube4aE9Q735 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ube4aE9Q735 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ube4aE9Q735 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms