Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4lE9Q2N0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4lE9Q2N0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Gm6222-201ENSMUST00000120787 396 ntBASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cpsf4lE9Q2N0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Gm6415-201ENSMUST00000118488 348 ntBASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Gm25948-201ENSMUST00000175334 112 ntBASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cpsf4lE9Q2N0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms